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Bayesian Decoding of Tactile Afferents Responsible for Sensorimotor Contro

Posted on:2018-03-13Degree:Ph.DType:Thesis
University:Western Sydney University (Australia)Candidate:Kasi, Patrick KFull Text:PDF
GTID:2478390020956808Subject:Biomedical engineering
Abstract/Summary:
In daily activities, humans manipulate objects and do so with great precision. Empirical studies have demonstrated that signals encoded by mechanoreceptors facilitate the precise object manipulation in humans, however, little is known about the underlying mechanisms. Models used in literature to analyze tactile afferent data range from advanced---for example some models account for skin tissue properties---to simple regression fit. These models, however, do not systematically account for factors that influence tactile afferent activity. For instance, it is not yet clear whether the first derivative of force influences the observed tactile afferent spike train patterns.;In this study, I use the technique of microneurography---with the help of Dr. Birznieks---to record tactile afferent data from humans. I then implement spike sorting algorithms to identify spike occurrences that pertain to a single cell. For further analyses of the resulting spike trains, I use a Bayesian decoding framework to investigate tactile afferent mechanisms that are responsible for sensorimotor control in humans. The Bayesian decoding framework I implement is a two stage process where in a first stage (encoding model) the relationships between the administered stimuli and the recorded tactile afferent signals is established, and a second stage uses results based on the first stage to make predictions. The goal of encoding model is to increase our understanding of the mechanisms that underlie dexterous object manipulation and, from an engineering perspective, guide the design of algorithms for inferring stimulus from previously unseen tactile afferent data, a process referred to as decoding.;Specifically, the objective of the study was to devise quantitative methods that would provide insight into some mechanisms that underlie touch, as well as provide strategies through which real-time biomedical devices can be realized. Tactile afferent data from eight subjects (18 - 30 years) with no known form of neurological disorders were recorded by inserting a needle electrode in the median nerve at the wrist. I was involved in designing experimental protocols, designing mechanisms that were put in place for safety measures, designing and building electronic components as needed, experimental setup, subject recruitment, and data acquisition. Dr. Ingvars Birznieks (performed the actual microneurography procedure by inserting a needle electrode into the nerve and identifying afferent types) and Dr. Heba Khamis provided assistance with the data acquisition and experimental design. The study took place at Neuroscience Research Australia (NeuRA).;I discovered that under my encoding model, the relative contributions of the force and its derivative are 1.26 and 1.02, respectively. This suggests that the force derivative contributes significantly to the spiking behavior of SA-I tactile afferents. This is a novel contribution because it provides a quantitative result to the long standing question of whether the force derivative contributes towards SA-I tactile afferent spiking behavior. As a result, I incorporated the first derivative of force, along with the force, in the encoding models I implemented in this thesis. The decoding model shows that SA-I fibers provide sufficient information for an approximation of the force profile. Furthermore, including fast adapting tactile afferents would provide better information about the first moment of contact and last moment of contact, and thus improved decoding results. Finally I show that a renewal point process encoding model captures interspike time and stimulus features better than an inhomogeneous Poisson point process encoding model. This is useful because it is now possible to generate synthetic data with statistical structure that is similar to real SA-I data: This would enable further investigations of mechanisms that underlie SA-I tactile afferents. (Abstract shortened by ProQuest.).
Keywords/Search Tags:Tactile afferent, Mechanisms that underlie, Bayesian decoding, Data, Encoding model, Humans
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