Font Size: a A A

CARBON-13 NMR STUDIES OF PROLINE BIOSYNTHESIS AND FORMALDEHYDE METABOLISM IN ESCHERICHIA COLI

Posted on:1987-05-17Degree:Ph.DType:Thesis
University:Queen's University at Kingston (Canada)Candidate:CRAWFORD, ANDREWFull Text:PDF
GTID:2470390017458414Subject:Chemistry
Abstract/Summary:
General methods for growing E. coli for NMR experiments have been described. The in vivo aerobiosis of concentrated cell suspen- sions in the magnet has been demonstrated using a 30 mL/minute continuous air stream. Assimilation of the ('13)C lactate methyl res- onance produced by anaerobic growth on glucose was used to indicate aerobic conditions.; Anaerobic in vivo ('13)C NMR has been used to detect the tran- sient formation of S-(hydroxymethyl)glutathione (GSCH(,2)OH) from endogenous-glutathione and ('13)C formaldehyde, at the onset of formaldehyde metabolism by E. coli. Two dimensional ('1)H-('13) shift correlation was used to locate the chemical shift of the cysteine and formaldehyde-derived protons and carbons of the adduct. The equi- librium constant (K(,eq)) for: GSH + CH(,2)O (DBLHARR) GSCH(,2)OH was found to be 950 (+OR-) 50 M('-1) at pH = 7 by ('13)C NMR. This equilibrium constitutes the initial reaction in vivo. The adduct remains intracellular and is subsequently consumed by metabolism.; A small batch culture technique has been developed and used to demonstrate simultaneous acetate consumption and proline produc- tion in a proline overproducing E. coli strain. The metabolism during exponential growth is readily monitored by in vivo ('13)C NMR. Proline isotopomer ratios were determined by ('13)C-('13)C scalar multiplet inten- sity analysis. The ratios of proline isotopomers derived from growth on 1-('13)C acetate, 2-('13)C acetate, 1-('13)C glucose and/or 20% D(,2)O indicate normal proline biosynthesis in this strain. Growth on 1-('13)C acetate yields 60% 1,5-('13)C(,2) proline and 35% 5-('13)C proline. These isotopomers may prove useful in other NMR studies using proline. Futile cycling has been identified in this strain by observing a switch in the location of the ('13)C label in the singly ('13)C labeled acetate substrate.; Gating the proton decoupler produces a maximum in signal intensity for C-5 proline using (pi)/3 pulses and a 3 second recycle delay. Equations describing this phenomenon in terms of T1 and NOE have been presented. A Cr(acac)(,3) doped external benzene standard has been used to relate nonthermal-equilibrium ('13)C signal intensities to concentration, within 20% of authentic values.
Keywords/Search Tags:NMR, '13, Proline, Coli, Metabolism, Used, Formaldehyde, Vivo
Related items