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Enhanced sampling method for free energy calculation and large scale conformational change

Posted on:2010-03-10Degree:M.SType:Thesis
University:Rice UniversityCandidate:Zhang, ChengFull Text:PDF
GTID:2442390002980472Subject:Chemistry
Abstract/Summary:
A method of directly computing the partition function (or the corresponding free energy) and accelerating configurational sampling is developed. In an expanded ensemble, the method can quickly sample a broad distribution and yield accurate results for the partition function. The method is shown to be efficient and accurate in studying thermodynamic properties, searching low-energy configurations of difficult molecular systems and counting solutions of puzzles.
Keywords/Search Tags:Method
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