| Objective: To study the association between overweight/obesity prevalence and copy number variations(CNVs)among Han,Uyghur,and Kazak children in Xinjiang,China;The ability of genetic risk score(GRS)to reflect genetic joint effects to improve risk assessment of overweight/obesity based on CNV calculations was analyzed.Methods: This study for the National Natural Science Foundation of China(81260440)follow-up survey and laboratory testing part.Stratified cluster random sampling was conducted to select 39 years old childre n(n=5992)in the early stage of the study in four areas of Xinjiang in 2014.A s the research site,taking kindergartens of Ili,Altay and Karamay in Xinjiang,3 to 7 years old children were selected by stratified cluster sampling method and measured the children`s height,weight and collected the oral mucosal exfoliated cells.AccuCopy? multiplex gene copy number method was used to detect the gene copy number variation of APOBR 、ATP2A1、ATXN2L、CHRNA4、COMT、EDN3、EGF、ELOVL6、ETNPPL、FTO、GNAS、GPRIN2、GSTT1、HADH、HES1、IL27、IRX3、ITGAD、ITGAM、MC4R、MIF、OR4P4、OR4S2、PCK1、PRIM2、SH2B1、SYT15 及 TUFM.SPSS 21 software description Uygur Han and Kazakh children CNV distribution and compared;To investigate the relationship between children’s overweight / obesity and the CNV of the candidate sites.According to the detection of CNV and the questionnaire,univariate and multivariate analysis were performed on the related factors of overweight / obesity in children.The GRS,ROC and AUC was calculated using SPSS21.0 Binary Logistic,ROC Curve and non-parametric method.NRI and IDI was calculated were using R software.Result:603 children have been surveyed,including 307 men and 296 women;Among them Han was 261,Uyghur was194 and Kazakh was 148,corresponding overweight/obesity rate was 28.3%,10.3% and 31.1%,respectively,this difference had statistically meaning.There were significant differences in the CNV of APOBR,ATP2A1,ATXN2 L,CHR NA4,ELOVL6,FTO1,GNAS2,GSTT1,HADH,HES11,HES12,IL27,IRX32,MC4R2,OR4P4,OR4S21,OR4S22,PCK1,PRIM22 in the three ethnic groups(P<0.05).There were significant differences in the CNV of OR4P4 and OR4S21 in Uygur normal children and overweight / obese children(P<0.05).The normal body weight and overweight/obesity there were significant differences in gene CNV between IRX31 and MC4R2 in children(P<0.05).There was a significant difference in CNV of ATXN2 L locus between normal weight and overweight / obese boys(P<0.05).Single factor and analysis sho wed that children’s nationality(OR=6.341,95%CI:1.97320.380)and(OR=3.349,95%CI:1.09210.276),only child(OR=0.404,95%CI:0.2400.679)high family in come(OR=7.76,95%CI:1.81632.347),mode of delivery(OR=1.780,95%CI:1.0912.903),CNV exception at IRX31 site(OR=2.251,95%1.0924.639)were influe nce factors of overweight/obesity.The inclusion of GRS in five traditional overweight / obesity risk factors,including ethnicity,only child,household income,mode of delivery at birth,and CNV abnormalities at IRX31 significantly improved the reclassification of the risk of overweight / obesity with NRI and IDI Were 3.85% and 0.024,respectively,all of which were statistically signific ant,but the inclusion of GRS did not significantly increase the AUC,only increased from 0.823 to 0.835(P>0.05)Conclusion: IRX31 CNV abnormalities are risk factors for overweight / obesity in children,suggesting that IRX3 as overweight / obesity-related susceptibility genes deserve further study.Children’s ethnicity,whether they are singletons,family income,mode of delivery at birth,and CNV abnormalities at IRX31 are the most common causes of overweight / obesity in children.The inclusion of GRS in traditional overweight / obesity risk prediction models can significantly improve the reclassification of overweight / obesity risk,but GRS did not significantly improve AUC. |