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Mechanisms Of Biotic Interaction For Coral Symbiosis And The Related Omics Responses To The Ocean Changes

Posted on:2019-09-22Degree:DoctorType:Dissertation
Country:ChinaCandidate:Z Y LinFull Text:PDF
GTID:1480305702488244Subject:Biochemistry and Molecular Biology
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Coral reefs is one of most important ecosystems on the earth.Global reefs are facing an unprecedented crisis,due to the high risk of anthropogenic-induced ocean environmental variability.However,little is known about how the functional interactions facilitated by the tripartite relationship between corals,Symbiodinium,and the associated microbiome.And their molecular responses to the ocean changes,yet this is crucial to coral bleach and survival in global climate change or extreme events in near-future.Galaxea fascicularis,a type of massy reef-building coral was used in this study,based on the investigations of the laboratory experiments and naturally environmental samples,we used the molecular biological and omics-approach to elucidate the features of the potential adaptation biology basis of the symbiotic corals coping to the ocean changes.Herein,the morphological study of G.fascicularis will be helpful for understanding the biological processes for coral symbiosis and calcification.We present an effective and accurate Taqman PCR protocol for estimating the prevalence of background Symbiodinium population in reefs.We report the first transcriptome generated coral G.fascicularis and provide a more comprehensive genetic information.Transcriptome profiling of G.fascicularis and its endosymbiont Symbiodinium reveals striking metabolic mutualism with respect to vitamins,cofactors,amino acids,fatty acids,and secondary metabolite biosynthesis between partners.And large sets of transcription factors,cell signal transduction molecules,biomineralization components,and galaxin-related proteins were expanded in G.fascicularis relative to other coral species.We identified the several genes that were differentially expressed in eutrophied hosts and symbionts,respectively,both gene sets included pathways related to stress responses and metabolic interactions,perhaps represented the genetic signs of tolerance to eutrophication in Beibu gulf.The acute transcriptomic also indicates the coral-algae interaction is capable of dynamically regulating the dissolved inorganic carbon(DIC)budgets to reallocate its photosynthetic and calcified outputs in response to the pH fluctuation.The utility of holo-proteomics for studies of short-term ocean acidification(OA)effects on the G.fascicularis,suggestion that coral holobionts have an inbuilt capacity to mitigate acidulated stress,to maintain reefs organismal homeostasis of acid-base,energy and symbiosis systems,however,the external OA stressful stimuli is still ability to negatively affect the defense responses and immune system,which maybe play important roles in bleaching during OA.Additionally,based on microbiome analysis here,we found that OA have a significant disturbance in the associated microbial communities and functions,which may impact host resilience and holobiont fitness.Overall,the data presented in this study extend our understanding of biotic interactions of coral symbiosis and the molecular responses of the coral host and symbiont partners to an ocean changing,as well raises interesting questions for future studies.
Keywords/Search Tags:Coral reefs, Symbiodinium, Taqman PCR, molecular interaction, transcriptomic response, ocean acidification
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