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The gating mechanism of the large mechanosensitive channel in Escherichia coli and effects of gain-of-function mutations

Posted on:2006-04-24Degree:Ph.DType:Dissertation
University:University of Maryland, College ParkCandidate:Chiang, Chien-SungFull Text:PDF
GTID:1454390008464311Subject:Biology
Abstract/Summary:
The mechanosensitive channel of large conductance (MscL) in Escherichia coli is perhaps the best-characterized mechanosensitive protein. The structure of the Mycobacterium tuberculosis ortholog has been solved recently by X-ray crystallography, but the structural rearrangements associated with gating remain obscure. Based on the crystal structure, a homology model of E. coli MscL had been built and the gating process was proposed (Sukharev et al., 2001). I experimentally verified these working models. The result demonstrates that the iris-like expansion of M1 helixes does occur during the gating transition. In addition to the hydrophobic M1 gate, the S1 segments unresolved in the original crystal structure were easily cross-linked with pairs of cysteines and prevented opening, consistent with the proposed function of a second gate. Although the early models predicted a wide-open conformation with cytoplasmic S3 domains separated, the current data strongly suggest that S3 domains are in fact stably associated in both closed and open conformations.; The open-state model predicts an in-plane expansion of the channel protein of about 23 nm2. The analysis of multiple MscL dose-response curves, accounting for nonhomogeneity of channels in a population, (i.e. variable energy or area changes for individual channels), estimated the total channel expansion ∼20 nm2 and the transition energy ∼52 kT, consistent with molecular models of the open state. Gain-of-function (GOF) mutants with hydrophilic or charged substitutions in the main hydrophobic gate stably occupy low-conducting substates. The character of perturbations introduced in the main gate by GOF substitutions strongly supports the two-gate mechanism in which the first sub-transition (C → S) can be viewed as the opening of the M1 gate formed by the first transmembrane domains, resulting in an expanded leaky conformation (S). The second sub-transition (S → O) can be attributed to the separation of the N-terminal (S1) gate resulting in the fully conductive channel.
Keywords/Search Tags:Channel, Mechanosensitive, Coli, Gate, Gating
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