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Analysis of the virulence protein VirB6 and the assembly of the type IV secretion apparatus of Agrobacterium tumefaciens

Posted on:2006-11-16Degree:Ph.DType:Dissertation
University:University of MinnesotaCandidate:Judd, Paul KevinFull Text:PDF
GTID:1451390008966906Subject:Biology
Abstract/Summary:
Type IV secretion (T4S) is used by pathogenic microorganisms to transfer effector macromolecules to eukaryotic cells. The VirB/D4 apparatus of Agrobacterium tumefaciens transfers DNA and proteins to plant cells and forms a conduit spanning the bacterial membranes, allowing substrate export. This study investigated the role of VirB6 in T4S. VirB6 is a polytopic inner-membrane protein. Computer models predict up to nine hydrophobic regions that can function as transmembrane (TM) segments. Using alkaline phosphatase fusions, I observed that only four of these participate in membrane-spanning. Both the N and C-terminii of the protein lie in the cytoplasm. Mutagenesis studies suggested the periplasmic loop P1 and TM3 are important for VirB6 function. Deletion of virB6 showed a loss of VirB7 homodimer formation, but did not affect VirB3 and VirB5 accumulation. Using immuno-fluorescence microscopy, VirB6 was found to localize to the cell pole. Polar localization required five VirB proteins, VirB7-VirB11, suggesting that a complex of proteins is necessary to target VirB6 to the cell pole. A conserved tryptophan at position 197, as well as the C-terminus of the protein are essential for its polar targeting. A similar analysis demonstrated that ten VirB proteins localized to the cell pole and assemble a macromolecular VirB complex at the pole. Neither the assembly of the complex nor polar localization of a VirB protein requires ATP. Instead, other VirB proteins are required for the polar localization of at least six VirB proteins suggesting the importance of protein-protein interactions in the targeting of VirB proteins to the pole. Analysis of mutants and strains expressing a specific virB gene indicated that four proteins, VirB3, VirB4, VirB8 and VirB11, could target themselves to a cell pole. Colocalization and other experiments indicated that VirB6-VirB10 are the structural components of the T4S apparatus. Analysis of strains that express virB6-virB11 or its subsets indicated that VirB7-VirB10 are the minimum components necessary for the assembly of a polar VirB complex. In the presence of VirB11, VirB6 associates with this complex to form the T4S apparatus. The VirB8 protein functions as the assembly factor, targeting the apparatus to a cell pole.
Keywords/Search Tags:Virb, Apparatus, Protein, T4S, Assembly, Cell pole
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