Inter/intra molecular dynamics in gases and liquids studied by terahertz time-domain spectroscopy

This thesis presents a description of the low-frequency terahertz (THz) absorption spectrum of a variety of materials that are of interest to many biological and chemical processes. The work described here encompasses the development of time-domain THz spectrometers, based on amplified Ti: Sapphire lasers systems as well as mode-locked Erbium doped fiber lasers as the driving source. These systems were applied to characterize the absorption spectrum of liquid water and water vapor, heavy water vapor, methanol vapor and tryptophan in the 0.2-2.2THz frequency range. The absorption profiles observed are closely related to the intermolecular or intramolecular motions in the materials of interest. In liquid water, the absorption profile shows evidence for modes due to large-scale structure amongst individual water molecules. The effects on the overall absorption profile are further deduced by the addition of various solutes which can enhance or break the formation of molecule networks. Various solutions are examined such as KCl in liquid water. Ions can change the strength of hydrogen bond in liquid water in the similar way as temperature does. Both K+ and Cl- are considered to be strong "structure breakers" in terms of their functions as softening the strength of hydrogen bond in liquid water. Theoretically, this will cause a red shift of some mode frequencies, reducing the absorption intensity at those frequencies and, at the same time, increasing the absorption at non-mode frequencies toward the vicinity of the low frequencies. For liquid water, the vapor phase was also examined, where for varying concentrations (humidity) Beer's Law does not hold to explain the observed absorption profiles. Again the reduced absorption of certain modes is explained by interactions between water monomers and their nature due to hydrogen spins. There are two species of water molecules in terms of the nuclear spin effect of hydrogen atoms in water molecule, ortho-water and para-water. The two types of water molecules present significantly different properties, e.g. different surface adsorption on metals. The effects of para-water and ortho-water on the THz absorption profile are discussed. Finally, I discuss the absorption profile of methanol vapor and tryptophan. In methanol vapor we observe coherent echoes after absorption by a THz transient and attribute it to the relaxation of the molecule due to the regularly spaced rotational manifold. In tryptophan two distinct absorption modes are observed due to torsional modes. These "soft-modes" are calculated and attributed to intramolecular motions between various atoms. The results of this body of work are discussed in the context of applications ranging from medicine, pharmaceuticals and the cosmetics industries.